BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C08SP1|AL429038
(893 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1609 1770 0.0
3x_Contig1082 377 e-104
>3x_Contig1609
Length = 15966
Score = 1770 bits (893), Expect = 0.0
Identities = 893/893 (100%)
Strand = Plus / Plus
Query: 1 gttcaggtttacaaaattcccattaaccctattttcctgctttccttccggttgccttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2989 gttcaggtttacaaaattcccattaaccctattttcctgctttccttccggttgccttga 3048
Query: 61 aaattccgaaaagaaattgttgcggaataactagataatccgagatcagttaatcggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3049 aaattccgaaaagaaattgttgcggaataactagataatccgagatcagttaatcggaca 3108
Query: 121 taaataatcttaacggccccgggtgaatagtaattacattgcatgattctgtatgataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3109 taaataatcttaacggccccgggtgaatagtaattacattgcatgattctgtatgataat 3168
Query: 181 gccttgaagttcaatataacacatttcggacagtccgctggtttaacattcaactgtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3169 gccttgaagttcaatataacacatttcggacagtccgctggtttaacattcaactgtaaa 3228
Query: 241 aaagagaaagcggaatatctttctcccctttttttttccctttattattgatcttggcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3229 aaagagaaagcggaatatctttctcccctttttttttccctttattattgatcttggcga 3288
Query: 301 tcacgcaattagaaaccagtattttagattcaacacagctctttgtttgtccctttatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3289 tcacgcaattagaaaccagtattttagattcaacacagctctttgtttgtccctttatca 3348
Query: 361 gtatcgtttaattatcgcatgatgcgagattttttttggaaaactcgaatgcactaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3349 gtatcgtttaattatcgcatgatgcgagattttttttggaaaactcgaatgcactaggct 3408
Query: 421 ttggaagtgtccatagcagtataaagttatgtctttctgatttaatggtcgtatccgatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3409 ttggaagtgtccatagcagtataaagttatgtctttctgatttaatggtcgtatccgatg 3468
Query: 481 gcgggtatgcgttctgtcattgtatttaatcggaaagataattgaaatccaacatattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3469 gcgggtatgcgttctgtcattgtatttaatcggaaagataattgaaatccaacatattct 3528
Query: 541 ataagtggaacacaattaatacagaggttacaggaaataaaggcagtactaaaaaatgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3529 ataagtggaacacaattaatacagaggttacaggaaataaaggcagtactaaaaaatgtg 3588
Query: 601 gatattatgaggcgttaaagtgcgacatatactttgggcgttttcagtgacatgtctttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3589 gatattatgaggcgttaaagtgcgacatatactttgggcgttttcagtgacatgtctttt 3648
Query: 661 tgaatatttctttgcggaggaagtatataaacgaaagatttctcgaaggaaaaacaaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3649 tgaatatttctttgcggaggaagtatataaacgaaagatttctcgaaggaaaaacaaaat 3708
Query: 721 agcttgaacttggaaagtattgtatatcgagtaaaagtgcatttaatgatagagatatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3709 agcttgaacttggaaagtattgtatatcgagtaaaagtgcatttaatgatagagatatca 3768
Query: 781 ttaatcgtctattagaaattacatcaacacagcaaaagacatgactagtccatctggaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3769 ttaatcgtctattagaaattacatcaacacagcaaaagacatgactagtccatctggaga 3828
Query: 841 atttccaagtctaaaattgaataccggtgcatcaatcccgcagctcggtttcg 893
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3829 atttccaagtctaaaattgaataccggtgcatcaatcccgcagctcggtttcg 3881
Score = 194 bits (98), Expect = 2e-49
Identities = 223/264 (84%), Gaps = 8/264 (3%)
Strand = Plus / Plus
Query: 54 gccttgaaaattccgaaaagaaattgttgcggaataactagataatccgagatcagttaa 113
||||| |||||||||||||||||| |||||||| || ||||||||||||||||| |||
Sbjct: 8129 gccttaaaaattccgaaaagaaatacttgcggaagaaacagataatccgagatcagctaa 8188
Query: 114 tcggacataaataatcttaacggccccgggtgaatagtaattacattgcatgattctgta 173
|||||||||||||| || ||||||||||| |||| |||||||||||||| |||| |||||
Sbjct: 8189 tcggacataaataaactcaacggccccggatgaacagtaattacattgcgtgatactgta 8248
Query: 174 tga-----taatgccttgaagttcaatataacacatttcggacagtccgctggtttaaca 228
|| || || ||||||||||||||||||||||||| ||||||| ||| ||| ||
Sbjct: 8249 ggatatactactgtcttgaagttcaatataacacatttcagacagtctgctagttgaaat 8308
Query: 229 ttcaactgtaaaaaagagaaagcggaatatctttctcccctttttttttccctttattat 288
||||||||| || | | |||| ||||||||||||| | |||||| |||||||||| |
Sbjct: 8309 ttcaactgtgaatagcaaaaagtggaatatctttctgc---ttttttctccctttatttt 8365
Query: 289 tgatcttggcgatcacgcaattag 312
|||||| |||||| ||||||||||
Sbjct: 8366 tgatctcggcgattacgcaattag 8389
>3x_Contig1082
Length = 4646
Score = 377 bits (190), Expect = e-104
Identities = 404/473 (85%), Gaps = 3/473 (0%)
Strand = Plus / Minus
Query: 420 tttggaagtgtccatagcagtataaagttatgtctttctgatttaatggtcgtatccgat 479
|||||||||| ||| ||||| |||||||| || || |||||||||| || ||||||||
Sbjct: 2938 tttggaagtggtcattgcagtctaaagttacgtgttgctgatttaatcgttgtatccgaa 2879
Query: 480 ggcgggtatgcgttctgtcattgtatttaatcggaaagataattgaaatccaacatattc 539
|| || | || ||||||||||||| |||||||||| | ||||||||||||||| ||
Sbjct: 2878 ggtggc-agacgcactgtcattgtattaaatcggaaaggaatttgaaatccaacataatc 2820
Query: 540 tataagtggaacacaattaatacagaggttacaggaaataaaggcagtactaaaaaatgt 599
|||||| | | | |||||||||||| ||||||| ||||||| |||| || || | |||
Sbjct: 2819 tataagcgagatgcgattaatacagagattacagggaataaagacagtgctgaagattgt 2760
Query: 600 ggatattatgaggcgttaaagtgcgacatatactttgggcgttttcagtgacatgtcttt 659
|||||||||| ||||| |||| ||||| ||||||| || |||||||||| ||| || |
Sbjct: 2759 agatattatgaagcgttgaagtatgacatgtactttgagctttttcagtgaaatgactct 2700
Query: 660 ttgaatatttctttgcggaggaagtatataaacgaaagatttctcgaaggaaaaacaaaa 719
|||||||||||||||| ||||| |||| |||||||| ||||||||||||||||| |||
Sbjct: 2699 ttgaatatttctttgcagaggac--atattaacgaaagttttctcgaaggaaaaactaaa 2642
Query: 720 tagcttgaacttggaaagtattgtatatcgagtaaaagtgcatttaatgatagagatatc 779
|||| |||| |||| ||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 2641 tagcatgaatttgggaagtattgtatatcgagtaaaagtgtatttgatgatagagatatc 2582
Query: 780 attaatcgtctattagaaattacatcaacacagcaaaagacatgactagtccatctggag 839
|| ||| ||||||||||||||||||||||||||||||| ||||||||||||||| | |
Sbjct: 2581 atcaattgtctattagaaattacatcaacacagcaaaatacatgactagtccatttccaa 2522
Query: 840 aatttccaagtctaaaattgaataccggtgcatcaatcccgcagctcggtttc 892
||||||||||| |||||||||||||||||||||||||| || | |||||||||
Sbjct: 2521 aatttccaagtttaaaattgaataccggtgcatcaatcacgtacctcggtttc 2469
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7636
Number of Sequences: 1807
Number of extensions: 7636
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 2
length of query: 893
length of database: 10,358,551
effective HSP length: 16
effective length of query: 877
effective length of database: 10,329,639
effective search space: 9059093403
effective search space used: 9059093403
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)